Webbphytools-package phytools: Phylogenetic Tools for comparative biology (and other things) 6 add.arrow Description phytools provides functions for phylogenetic comparative biology; as well as several other func-tions for tree inference, manipulation, and analysis that are not implemented in other R packages. Webb15 dec. 2011 · phytools: an R package for phylogenetic comparative biology (and other things) - Revell - 2012 - Methods in Ecology and Evolution - Wiley Online Library Methods in Ecology and Evolution APPLICATION Free Access phytools: an R package for phylogenetic comparative biology (and other things) Liam J. Revell First published: 15 December 2011
CRAN - Package phytools
Webbmake.simmap uses code that has been adapted from ape 's function ace (by Paradis et al.) to perform Felsenstein's pruning algorithm to compute the likelihood. As of phytools >= 0.2-33 x can be a vector of states or a matrix containing the prior probabilities of tip states in rows. In this case the column names of x should contain the states ... Webb1 jan. 2024 · phytools-package phytools: Phylogenetic Tools for comparative biology (and other things) 6 add.arrow Description phytools provides functions for phylogenetic comparative biology; as well as several other func-tions for tree inference, manipulation, and analysis that are not implemented in other R packages. egg standing up straight in water
Phytools.com Site
Webb7 mars 2024 · phytools: Phylogenetic Tools for Comparative Biology (and Other Things) A wide range of methods for phylogenetic analysis - concentrated in phylogenetic comparative biology, but also including numerous techniques for visualizing, analyzing, manipulating, reading or writing, and even inferring phylogenetic trees. Webbphytools: Phylogenetic Tools for Comparative Biology (and Other Things) A wide range of methods for phylogenetic analysis - concentrated in phylogenetic comparative biology, but also including numerous techniques for visualizing, analyzing, manipulating, reading or writing, and even inferring phylogenetic trees. Webb7 mars 2024 · tree: an object of class "phylo".In the case of fitmultiMk an object of class "simmap" with a mapped discrete character.. x: a vector of tip values for species; names(x) should be the species names. In the case of plot and density methods, an object of the appropriate class.. model: model. See make.simmap or ace for details.. fixedQ: fixed … folder out wall wardrobe