Polymirts database 3.0

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August undefined, 2024

WebFunctional SNPs in 3′untranslated regions (3′UTR) predicted by PolymiRTS data base 3.0 SNPs in 3′UTR of FTO gene were submitted as batch to PolymiRTS server. The output … WebPolymiRTS. polymorphisms in microRNA target sites with complex traits. Polymorphism in microRNA Target Site ( PolymiRTS) is a database of naturally occurring DNA variations in …

HBV genotype-dependent association of HLA variants with the …

WebJun 19, 2024 · We used MirSNP, the PolymiRTS Database 3.0, and MicroSNiPer to predict the SNP rs4937333 located in the seed region of the miR-5003 target sites of ETS1. To investigate the binding affinity of miR-5003 to the target sites with rs4937333 variants, we used a 60-bp region (containing the seed site) to calculate the energies of the secondary … WebSep 7, 2024 · The latest version of this database is PolymiRTS Database 3.0, which saved more miRNA-mRNA interactions obtained from CLASH (cross linking, ligation and … high blood pressure and nose bleeding

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WebSep 10, 2013 · PolymiRTS (Polymorphism in microRNAs and their TargetSites) is a database of naturally occurring DNA variations in microRNA (miRNA) seed regions and miRNA … WebMay 29, 2014 · Regarding this phenomenon, SNPs at miRNA target sites can also alter miRNA function and a certain number of databases such as polymiRTS , Patrocles , and miRdSNP , have been built to help identifying the impacts of SNPs in miRNA and target interaction. polymiRTS presents the polymorphisms in putative miRNA target regions and … WebBackground: MicroRNAs (miRNAs) are small non-coding RNAs that function in regulation of gene expression. Recent studies have also suggested that single nucleotide … high blood pressure and ocular migraine

Anindya Bhattacharya, PhD - Senior Bioinformatics Scientist

Polymirts database 3.0

dbMTS: a comprehensive database of putative human microRNA …

WebPolymorphism in microRNAs and their Target Sites (PolymiRTS) database 3.0 incorporates data from ligation, hybrids sequence, and crosslink experiments to analyze miRNA–mRNA … WebOct 24, 2013 · DATABASE ACCESS. The PolymiRTS database can be accessed using browse and search interfaces. Different filtering options to set experimental types, target …

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WebOct 24, 2013 · BRCA1 3 0 UTR reveals a variant in a breast cancer case that. ... The PolymiRTS database identified the predicted binding sites of interested SNPs and the … WebAug 10, 2015 · We selected 3 SNPs (rs107822, rs3803808, rs2296616) within +/−500 bp of hsa-pre-miR-219, hsa-pre-miR-132 and hsa-pre-miR-107 transcripts and 6 …

WebPolymiRTS (Poly morphism in mi cro R NAs and their T arget S ites) is a database of DNA variations in microRNA seed regions and microRNA target sites. PolymiRTS Database … WebNational Center for Biotechnology Information

WebMar 26, 2024 · ClinVar database was used for additional information about genomic variation and its relationship to human health 31. Finally, information about microRNAs … WebJun 19, 2024 · PDF Mutations in and reduced expression of the ETS1 gene may be associated with systemic lupus erythematosus (SLE). Here, we report a replication... Find, read and cite all the research you ...

WebBhattacharya, A., J. D. Ziebarth, and Y. Cui. 'Polymirts Database 3.0: Linking Polymorphisms In Micrornas And Their Target Sites With Human Diseases And Biological Pathways'. …

http://svhttdl.thanhhoa.gov.vn/blog/l1t7-hbv-genotype-dependent-association-of-hla-variants-with-the-serodecline/ high blood pressure and nosebleedsWebMar 11, 2016 · Bhattacharya A, Ziebarth JD, Cui Y. PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological … high blood pressure and obesityhttp://www.sciepub.com/reference/143014 high blood pressure and overweight high blood pressure and normal pulse rateWebJun 5, 2024 · Table 5 The influence of rs929271 on the creation of miRNA target sites using PolymiRTS database. Full size table. Fig. 2. The effect of rs929271 T>G on the secondary structure of the full-length LIF-mRNA structure by RNAfold. a, c The effect of T and G alleles on the mRNA folding structure. high blood pressure and pain in chestWebAmong the 100 SNPs genotyped, 75 SNPs were further analyzed after excluding 2 SNPs with genotyping failure and 23 SNPs, which were deviated from the Hardy–Weinberg … high blood pressure and out of breathhttp://article.sapub.org/10.5923.j.bioinformatics.20240901.02.html high blood pressure and on medication